Efficient Bayesian multivariate fMRI analysis using a sparsifying spatio-temporal prior
نویسندگان
چکیده
Bayesian logistic regression with a multivariate Laplace prior is introduced as a multivariate approach to the analysis of neuroimaging data. It is shown that, by rewriting the multivariate Laplace distribution as a scale mixture, we can incorporate spatio-temporal constraints which lead to smooth importance maps that facilitate subsequent interpretation. The posterior of interest is computed using an approximate inference method called expectation propagation and becomes feasible due to fast inversion of a sparse precision matrix. We illustrate the performance of the method on an fMRI dataset acquired while subjects were shown handwritten digits. The obtained models perform competitively in terms of predictive performance and give rise to interpretable importance maps. Estimation of the posterior of interest is shown to be feasible even for very large models with thousands of variables.
منابع مشابه
Assessment of Neonate's Congenital Hypothyroidism Pattern Using Poisson Spatio-temporal Model in Disease Mapping under the Bayesian Paradigm during 2011-18 in Guilan, Iran
Background: Congenital Hypothyroidism (CH) is one of the reasons for mental retardation and defective growth in neonates. It can be treated if it is diagnosed early. The congenital hypothyroidism can be diagnosed using newborn screening in the first days after birth. Disease mapping helps to identify high-risk areas of the disease. This study aimed to evaluate the pattern of CH using the Poisso...
متن کاملImproving the Performance of ICA Algorithm for fMRI Simulated Data Analysis Using Temporal and Spatial Filters in the Preprocessing Phase
Introduction: The accuracy of analyzing Functional MRI (fMRI) data is usually decreases in the presence of noise and artifact sources. A common solution in for analyzing fMRI data having high noise is to use suitable preprocessing methods with the aim of data denoising. Some effects of preprocessing methods on the parametric methods such as general linear model (GLM) have previously been evalua...
متن کاملSpatio-temporal models of mental processes from fMRI
Understanding the highly complex, spatially distributed and temporally organized phenomena entailed by mental processes using functional MRI is an important research problem in cognitive and clinical neuroscience. Conventional analysis methods focus on the spatial dimension of the data discarding the information about brain function contained in the temporal dimension. This paper presents a ful...
متن کاملSpatio-Temporal Tensor Analysis for Whole-Brain fMRI Classification
Owing to prominence as a research and diagnostic tool in human brain mapping, whole-brain fMRI image analysis has been the focus of intense investigation. Conventionally, input fMRI brain images are converted into vectors or matrices and adapted in kernel based classifiers. fMRI data, however, are inherently coupled with sophisticated spatio-temporal tensor structure (i.e., 3D space × time). Va...
متن کاملA Bayesian multilevel model for fMRI data analysis
Bayesian approaches have been proposed by several functional magnetic resonance imaging (fMRI) researchers in order to overcome the fundamental limitations of the popular statistical parametric mapping method. However, the difficulties associated with subjective prior elicitation have prevented the widespread adoption of the Bayesian methodology by the neuroimaging community. In this paper, we ...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- NeuroImage
دوره 50 1 شماره
صفحات -
تاریخ انتشار 2010